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1

MICROBIAL DIVERSITY IN SOIL: Selection of Microbial Populations by Plant and Soil Type and Implications for Disease Suppressiveness

Garbeva, P., van Veen, J.A., van Elsas, J.D.

Journal:

Annual Review of Phytopathology

Year:

2004

Language:

english

File:

PDF, 339 KB

english, 2004

2

The Ecological Role of Volatile and Soluble Secondary Metabolites Produced by Soil Bacteria

Tyc,, Olaf, Song, Chunxu, Dickschat, Jeroen S., Vos, Michiel, Garbeva, Paolina

Journal:

Trends in Microbiology

Year:

2017

Language:

english

File:

PDF, 2.53 MB

english, 2017

3

The effect of isabelin, a sesquiterpene lactone from Ambrosiaartemisiifolia, on soil microorganisms and human pathogens.

Molinaro, Francesco, Tyc, Olaf, Beekwilder, Jules, Cankar, Katarina, Bertea, Cinzia Margherita, Negre, Michèle, Garbeva, Paolina

Journal:

FEMS Microbiology Letters

Year:

2018

Language:

english

File:

PDF, 917 KB

english, 2018

4

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms

Mendes, Rodrigo, Garbeva, Paolina, Raaijmakers, Jos M.

Journal:

FEMS Microbiology Reviews

Year:

2013

Language:

english

File:

PDF, 764 KB

english, 2013

5

PredominantBacillusspp. in Agricultural Soil under Different Management Regimes Detected via PCR-DGGE

P. Garbeva, J.A. van Veen, J.D. van Elsas

Journal:

Microbial Ecology

Year:

2003

Language:

english

File:

PDF, 363 KB

english, 2003

6

Inter-specific Interactions Between Carbon-limited Soil Bacteria Affect Behavior and Gene Expression

Paolina Garbeva and Wietse de Boer

Journal:

Microbial Ecology

Year:

2009

Language:

english

File:

PDF, 1.71 MB

english, 2009

7

Predominant Bacillus spp. in Agricultural Soil under Different Management Regimes Detected via PCR-DGGE

P. Garbeva, J. A. van Veen and J. D. van Elsas

Journal:

Microbial Ecology

Year:

2003

Language:

english

File:

PDF, 895 KB

english, 2003

8

Decay of low-density polyethylene by bacteria extracted from earthworm's guts: A potential for soil restoration

Huerta Lwanga, Esperanza, Thapa, Binita, Yang, Xiaomei, Gertsen, Henny, Salánki, Tamás, Geissen, Violette, Garbeva, Paolina

Journal:

Science of The Total Environment

Year:

2018

Language:

english

File:

PDF, 917 KB

english, 2018

9

Calling from distance: attraction of soil bacteria by plant root volatiles

Schulz-Bohm, Kristin, Gerards, Saskia, Hundscheid, Maria, Melenhorst, Jasper, de Boer, Wietse, Garbeva, Paolina

Journal:

The ISME Journal

Year:

2018

Language:

english

File:

PDF, 2.01 MB

english, 2018

10

A fragrant neighborhood: volatile mediated bacterial interactions in soil

Schulz-Bohm, Kristin, Zweers, Hans, de Boer, Wietse, Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2015

Language:

english

File:

PDF, 1.26 MB

english, 2015

11

Pathogen suppression by microbial volatile organic compounds in soils

de Boer, Wietse, Li, Xiaogang, Meisner, Annelein, Garbeva, Paolina

Journal:

FEMS Microbiology Ecology

Year:

2019

Language:

english

File:

PDF, 960 KB

english, 2019

12

Volatile‐mediated antagonism of soil bacterial communities against fungi

Li, Xiaogang, Garbeva, Paolina, Liu, Xiaojiao, klein Gunnewiek, Paulien JA, Clocchiatti, Anna, Hundscheid, Maria PJ, Wang, Xingxiang, Boer, Wietse

Journal:

Environmental Microbiology

Year:

2019

Language:

english

File:

PDF, 4.08 MB

english, 2019

13

Assessment of the diversity, and antagonism towards Rhizoctonia solani AG3, of Pseudomonas species in soil from different agricultural regimes

Paolina Garbeva, Johannes Antonie van Veen, Jan Dirk van Elsas

Journal:

FEMS Microbiology Ecology

Year:

2004

Language:

english

File:

PDF, 436 KB

english, 2004

14

Inter-specific Interactions Between Carbon-limited Soil Bacteria Affect Behavior and Gene Expression

Paolina Garbeva, Wietse de Boer

Journal:

Microbial Ecology

Year:

2009

Language:

english

File:

PDF, 224 KB

english, 2009

15

Rhizosphere microbial community and its response to plant species and soil history

P. Garbeva, J. D. van Elsas, J. A. van Veen

Journal:

Year:

2008

Language:

english

File:

PDF, 399 KB

english, 2008

16

Effect of above-ground plant species on soil microbial community structure and its impact on suppression of Rhizoctonia solani AG3

P. Garbeva, J. Postma, J. A. Van Veen, J. D. Van Elsas

Journal:

Environmental Microbiology

Year:

2006

Language:

english

File:

PDF, 215 KB

english, 2006

17

Effects of agronomical measures on the microbial diversity of soils as related to the suppression of soil-borne plant pathogens

Jan Dirk van Elsas, Paolina Garbeva, Joana Salles

Journal:

Year:

2002

Language:

english

File:

PDF, 128 KB

english, 2002

18

Volatiles produced by the mycophagous soil bacterium Collimonas

Garbeva, Paolina, Hordijk, Cornelis, Gerards, Saskia, de Boer, Wietse

Journal:

FEMS Microbiology Ecology

Year:

2014

Language:

english

File:

PDF, 805 KB

english, 2014

19

Volatile affairs in microbial interactions

Schmidt, Ruth, Cordovez, Viviane, de Boer, Wietse, Raaijmakers, Jos, Garbeva, Paolina

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 773 KB

english, 2015

20

Volatile-mediated interactions between phylogenetically different soil bacteria

Garbeva, Paolina, Hordijk, Cornelis, Gerards, Saskia, de Boer, Wietse

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 1.87 MB

english, 2014

21

Impact of interspecific interactions on antimicrobial activity among soil bacteria

Tyc, Olaf, van den Berg, Marlies, Gerards, Saskia, van Veen, Johannes A., Raaijmakers, Jos M., de Boer, Wietse, Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2014

Language:

english

File:

PDF, 2.25 MB

english, 2014

22

Lessons from 1,3-Hydride Shifts in Sesquiterpene Cyclizations

Rinkel, Jan, Rabe, Patrick, Garbeva, Paolina, Dickschat, Jeroen S.

Journal:

Angewandte Chemie International Edition

Year:

2016

Language:

english

File:

PDF, 738 KB

english, 2016

23

The prey’s scent – Volatile organic compound mediated interactions between soil bacteria and their protist predators

Schulz-Bohm, Kristin, Geisen, Stefan, Wubs, E R Jasper, Song, Chunxu, de Boer, Wietse, Garbeva, Paolina

Journal:

The ISME Journal

Year:

2016

Language:

english

File:

PDF, 263 KB

english, 2016

24

Über 1,3-Hydridverschiebungen in Sesquiterpen-Cyclisierungen

Rinkel, Jan, Rabe, Patrick, Garbeva, Paolina, Dickschat, Jeroen S.

Journal:

Angewandte Chemie

Year:

2016

Language:

german

File:

PDF, 656 KB

german, 2016

25

Living apart together—bacterial volatiles influence methanotrophic growth and activity

Veraart, A. J., Garbeva, P., van Beersum, F., Ho, A., Hordijk, C. A., Meima-Franke, M., Zweers, A. J., Bodelier, P. L. E.

Journal:

The ISME Journal

Year:

2018

Language:

english

File:

PDF, 873 KB

english, 2018

26

Healthy scents: microbial volatiles as new frontier in antibiotic research?

Avalos, Mariana, van Wezel, Gilles P, Raaijmakers, Jos M, Garbeva, Paolina

Journal:

Current Opinion in Microbiology

Year:

2018

Language:

english

File:

PDF, 1.07 MB

english, 2018

27

Deciphering the genome and secondary metabolome of the plant pathogen Fusarium culmorum

Schmidt, Ruth, Durling, Mikael B, de Jager, Victor, Menezes, Riya C, Nordkvist, Erik, Svatoš, Aleš, Dubey, Mukesh, Lauterbach, Lukas, Dickschat, Jeroen S, Karlsson, Magnus, Garbeva, Paolina

Journal:

FEMS Microbiology Ecology

Year:

2018

Language:

english

File:

PDF, 1.91 MB

english, 2018

28

The antimicrobial volatile power of the rhizospheric isolate Pseudomonas donghuensis P482

Ossowicki, Adam, Jafra, Sylwia, Garbeva, Paolina, Grosch, Rita

Journal:

Year:

2017

Language:

english

File:

PDF, 1.31 MB

english, 2017

29

Volatiles in Inter-Specific Bacterial Interactions

Tyc, Olaf, Zweers, Hans, de Boer, Wietse, Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2015

Language:

english

File:

PDF, 4.56 MB

english, 2015

30

Microbial Small Talk: Volatiles in Fungal–Bacterial Interactions

Schmidt, Ruth, Etalo, Desalegn W., de Jager, Victor, Gerards, Saskia, Zweers, Hans, de Boer, Wietse, Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 1.38 MB

english, 2016

31

Editorial: Smelly Fumes: Volatile-Mediated Communication between Bacteria and Other Organisms

Weisskopf, Laure, Ryu, Choong-Min, Raaijmakers, Jos M., Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 211 KB

english, 2016

32

Microbial Volatiles: Small Molecules with an Important Role in Intra- and Inter-Kingdom Interactions

Schulz-Bohm, Kristin, Martín-Sánchez, Lara, Garbeva, Paolina

Journal:

Frontiers in Microbiology

Year:

2017

Language:

english

File:

PDF, 877 KB

english, 2017

33

Belowground Plant–Herbivore Interactions Vary among Climate-Driven Range-Expanding Plant Species with Different Degrees of Novel Chemistry

Wilschut, Rutger A., Silva, Julio C. P., Garbeva, Paolina, van der Putten, Wim H.

Journal:

Frontiers in Plant Science

Year:

2017

Language:

english

File:

PDF, 2.08 MB

english, 2017

34

Macro- and micro- plastics in soil-plant system: Effects of plastic mulch film residues on wheat ( Triticum aestivum ) growth

Qi, Yueling, Yang, Xiaomei, Pelaez, Amalia Mejia, Huerta Lwanga, Esperanza, Beriot, Nicolas, Gertsen, Henny, Garbeva, Paolina, Geissen, Violette

Journal:

Science of The Total Environment

Year:

2018

Language:

english

File:

PDF, 1.73 MB

english, 2018

35

Growth promotion and inhibition induced by interactions of groundwater bacteria

Geesink, Patricia, Tyc, Olaf, Küsel, Kirsten, Taubert, Martin, van de Velde, Charlotte, Kumar, Swatantar, Garbeva, Paolina

Journal:

FEMS Microbiology Ecology

Year:

2018

Language:

english

File:

PDF, 778 KB

english, 2018

36

LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species

Kulkarni, Purva, Wilschut, Rutger A., Verhoeven, Koen J. F., van der Putten, Wim H., Garbeva, Paolina

Journal:

Year:

2018

Language:

english

File:

PDF, 1.76 MB

english, 2018

37

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine

Janssens, Thierry K S, Tyc, Olaf, Besselink, Harrie, de Boer, Wietse, Garbeva, Paolina

Journal:

FEMS Microbiology Letters

Year:

2019

Language:

english

File:

PDF, 5.17 MB

english, 2019

38

Phylogenomic analyses and distribution of terpene synthases among Streptomyces

Martín-Sánchez, Lara, Singh, Kumar Saurabh, Avalos, Mariana, van Wezel, Gilles P, Dickschat, Jeroen S, Garbeva, Paolina

Journal:

Beilstein Journal of Organic Chemistry

Year:

2019

Language:

english

File:

PDF, 2.66 MB

english, 2019

39

Microbe-driven chemical ecology: past, present and future

Schmidt, Ruth, Ulanova, Dana, Wick, Lukas Y., Bode, Helge B., Garbeva, Paolina

Journal:

The ISME Journal

Year:

2019

Language:

english

File:

PDF, 613 KB

english, 2019

40

Airborne medicine – bacterial volatiles and their influence on plant health

Garbeva, Paolina, Weisskopf, Laure

Journal:

New Phytologist

Year:

2019

Language:

english

File:

PDF, 16.89 MB

english, 2019

41

The ecological role of bacterial seed endophytes associated with wild cabbage in the United Kingdom

Tyc, Olaf, Putra, Rocky, Gols, Rieta, Harvey, Jeffrey A., Garbeva, Paolina

Journal:

MicrobiologyOpen

Year:

2019

Language:

english

File:

PDF, 1.28 MB

english, 2019

42

Effects of plastic mulch film residues on wheat rhizosphere and soil properties

Qi, Yueling, Ossowicki, Adam, Yang, Xiaomei, Lwanga, Esperanza Huerta, Dini-Andreote, Francisco, Geissen, Violette, Garbeva, Paolina

Journal:

Journal of Hazardous Materials

Year:

2019

Language:

english

File:

PDF, 2.13 MB

english, 2019

43

Microbial and volatile profiling of soils suppressive to Fusarium culmorum of wheat

Ossowicki, Adam, Tracanna, Vittorio, Petrus, Marloes L. C., van Wezel, Gilles, Raaijmakers, Jos M., Medema, Marnix H., Garbeva, Paolina

Journal:

Proceedings Biological Sciences

Year:

2020

Language:

english

File:

PDF, 1.58 MB

english, 2020

44

Investigating the effect of belowground microbial volatiles on plant nutrient status: perspective and limitations

MartÃn-SÃ¡nchez, Lara, Ariotti, Cristiana, Garbeva, Paolina, Vigani, Gianpiero

Journal:

Journal of Plant Interactions

Year:

2020

File:

PDF, 2.38 MB

2020

45

A non-invasive soil-based setup to study tomato root volatiles released by healthy and infected roots

Gulati, Sneha, Ballhausen, Max-Bernhard, Kulkarni, Purva, Grosch, Rita, Garbeva, Paolina

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.91 MB

2020

46

Origin of the climatic cycles from orbital to sub-annual scales

D.A. Stoykova, Y.Y. Shopov, D. Garbeva, L.T. Tsankov, C.J. Yonge

Journal:

Journal of Atmospheric and Solar-Terrestrial Physics

Year:

2008

Language:

english

File:

PDF, 429 KB

english, 2008

47

Identification and sensitive endophytic detection of the fire blight pathogen Erwinia amylovora with 23S ribosomal DNA sequences and the polymerase chain reaction

M. MAES, P. GARBEVA, C. CREPEL

Journal:

Plant Pathology

Year:

1996

Language:

english

File:

PDF, 274 KB

english, 1996

48

Analysis of endophytic bacterial communities of potato by plating and denaturing gradient gel electrophoresis (DGGE) of 16S rDNA based PCR fragments

P. Garbeva, L. S. van Overbeek, J. W. L. van Vuurde, J. D. van Elsas

Journal:

Microbial Ecology

Year:

2001

Language:

english

File:

PDF, 2.11 MB

english, 2001

49

Phylogeny of nitrite reductase (nirK) and nitric oxide reductase (norB) genes from Nitrosospira species isolated from soil

Paolina Garbeva, Elizabeth M. Baggs, James I. Prosser

Journal:

FEMS Microbiology Letters

Year:

2007

Language:

english

File:

PDF, 271 KB

english, 2007

50

Transcriptional and antagonistic responses of Pseudomonas fluorescens Pf0-1 to phylogenetically different bacterial competitors

Garbeva, Paolina, Silby, Mark W, Raaijmakers, Jos M, Levy, Stuart B, Boer, Wietse de

Journal:

The ISME Journal

Year:

2011

Language:

english

File:

PDF, 903 KB

english, 2011

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